Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | LC55x_RS17070 | Not Available | Negative | 4260929 - 4261564 | 22876.2 |
| 30s ribosomal protein thx | LC55x_RS17075 | Not Available | Negative | 4261803 - 4262009 | 6923.46 |
| merc domain-containing protein | LC55x_RS17080 | Not Available | Negative | 4262192 - 4262599 | 14337.0 |
| tonb-dependent receptor | LC55x_RS17085 | Not Available | Positive | 4262703 - 4264727 | 72466.5 |
| marr family winged helix-turn-helix transcriptional regulator | LC55x_RS17090 | Not Available | Positive | 4264930 - 4265325 | 14464.7 |
| mfs transporter | LC55x_RS17095 | Not Available | Positive | 4265666 - 4266919 | 43365.2 |
| transcriptional repressor | LC55x_RS17100 | Not Available | Negative | 4267353 - 4267850 | 17974.5 |
| glutamate--trna ligase | LC55x_RS17105 | Not Available | Negative | 4267882 - 4269279 | 51599.9 |
| udp-2,3-diacylglucosamine diphosphatase | LC55x_RS17110 | Not Available | Positive | 4269477 - 4270211 | 26776.7 |
| hypothetical protein | LC55x_RS17115 | Not Available | Negative | 4270256 - 4271539 | 47871.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
