Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | LC55x_RS16875 | Not Available | Positive | 4218274 - 4219317 | 38408.0 |
| rna polymerase sigma factor | LC55x_RS16880 | Not Available | Positive | 4219441 - 4219992 | 20658.5 |
| hypothetical protein | LC55x_RS16885 | Not Available | Positive | 4220037 - 4220711 | 25769.0 |
| metalloregulator arsr/smtb family transcription factor | LC55x_RS16890 | Not Available | Negative | 4220787 - 4221101 | 11471.0 |
| fatty acid desaturase | LC55x_RS16895 | Not Available | Negative | 4221432 - 4222469 | 39380.8 |
| giy-yig nuclease family protein | LC55x_RS16900 | Not Available | Positive | 4222711 - 4223004 | 10907.1 |
| mapeg family protein | LC55x_RS16905 | Not Available | Negative | 4223008 - 4223397 | 14112.3 |
| zinc-dependent alcohol dehydrogenase family protein | LC55x_RS16910 | Not Available | Negative | 4223687 - 4224679 | 34514.7 |
| rna-binding s4 domain-containing protein | LC55x_RS16915 | Not Available | Positive | 4224841 - 4225065 | 7883.63 |
| hypothetical protein | LC55x_RS16920 | Not Available | Positive | 4225093 - 4225308 | 7754.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
