Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | LC55x_RS16620 | Not Available | Negative | 4159529 - 4160953 | 50140.8 |
| pitrilysin family protein | LC55x_RS16625 | Not Available | Negative | 4160967 - 4162367 | 50637.8 |
| 8-oxo-dgtp diphosphatase | LC55x_RS16630 | Not Available | Positive | 4162614 - 4163102 | 18349.9 |
| hypothetical protein | LC55x_RS16635 | Not Available | Negative | 4163235 - 4163786 | 19481.2 |
| hlyd family secretion protein | LC55x_RS16640 | Not Available | Negative | 4164965 - 4166122 | 40554.2 |
| paai family thioesterase | LC55x_RS16645 | Not Available | Negative | 4166119 - 4166568 | 15528.7 |
| tetr/acrr family transcriptional regulator | LC55x_RS16650 | Not Available | Negative | 4166565 - 4167191 | 22122.4 |
| dha2 family efflux mfs transporter permease subunit | LC55x_RS16655 | Not Available | Positive | 4167257 - 4168855 | 57320.9 |
| hypothetical protein | LC55x_RS16660 | Not Available | Negative | 4168868 - 4169419 | 20337.1 |
| dicarboxylate/amino acid:cation symporter | LC55x_RS16665 | Not Available | Negative | 4169433 - 4170758 | 45818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
