Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | LC55x_RS15850 | Not Available | Negative | 3979757 - 3980344 | 21248.8 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | LC55x_RS15855 | Not Available | Negative | 3980403 - 3982802 | 87816.7 |
| alpha/beta hydrolase | LC55x_RS15860 | Not Available | Negative | 3982816 - 3983343 | 18683.5 |
| mosc domain-containing protein | LC55x_RS15865 | Not Available | Negative | 3983756 - 3984268 | 17777.0 |
| n-acetylmuramoyl-l-alanine amidase | LC55x_RS15870 | Not Available | Positive | 3984291 - 3984872 | 21620.6 |
| acyl-coa thioesterase ii | LC55x_RS15875 | Not Available | Positive | 3984985 - 3985869 | 32584.5 |
| hypothetical protein | LC55x_RS15880 | Not Available | Positive | 3985871 - 3986722 | 31132.3 |
| hypothetical protein | LC55x_RS15885 | Not Available | Negative | 3986936 - 3987568 | 22783.2 |
| rna polymerase sigma factor | LC55x_RS15890 | Not Available | Positive | 3988018 - 3989313 | 45413.0 |
| duf11 domain-containing protein | LC55x_RS15895 | Not Available | Negative | 3989453 - 3991747 | 76797.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
