Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadar family protein | LC55x_RS15600 | Not Available | Positive | 3925375 - 3925932 | 20386.3 |
| hypothetical protein | LC55x_RS15605 | Not Available | Positive | 3925969 - 3926550 | 21022.2 |
| duf6165 family protein | LC55x_RS15610 | Not Available | Negative | 3926591 - 3926995 | 15032.0 |
| Trna-ser | Not Available | Not Available | Positive | 3927178 - 3927268 | Not Available |
| pp2c family serine/threonine-protein phosphatase | LC55x_RS15620 | Not Available | Positive | 3927814 - 3928518 | 25619.1 |
| dna polymerase iii subunit epsilon | LC55x_RS15625 | Not Available | Negative | 3928796 - 3929527 | 26754.8 |
| ribonuclease hi | LC55x_RS15630 | Not Available | Negative | 3929633 - 3930100 | 17450.7 |
| methyltransferase domain-containing protein | LC55x_RS15635 | Not Available | Negative | 3930132 - 3930986 | 29802.5 |
| hydroxyacylglutathione hydrolase | LC55x_RS15640 | Not Available | Positive | 3931234 - 3932034 | 28762.0 |
| lytic transglycosylase domain-containing protein | LC55x_RS28325 | Not Available | Positive | 3932031 - 3933437 | 49727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
