Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | LC55x_RS14635 | Not Available | Negative | 3695636 - 3697534 | 67733.3 |
| histidine--trna ligase | LC55x_RS14640 | Not Available | Negative | 3697839 - 3699239 | 52229.4 |
| Trna-pro | Not Available | Not Available | Positive | 3699483 - 3699559 | Not Available |
| hypothetical protein | LC55x_RS14650 | Not Available | Positive | 3700038 - 3700352 | 11944.7 |
| polysaccharide deacetylase family protein | LC55x_RS14655 | Not Available | Negative | 3700378 - 3701043 | 24134.5 |
| glycosyltransferase family 2 protein | LC55x_RS14660 | Not Available | Negative | 3701052 - 3702242 | 44212.3 |
| methyltransferase domain-containing protein | LC55x_RS14665 | Not Available | Positive | 3702643 - 3703374 | 26861.4 |
| mfs transporter | LC55x_RS14670 | Not Available | Positive | 3703403 - 3704746 | 48108.7 |
| hypothetical protein | LC55x_RS14675 | Not Available | Negative | 3704743 - 3707073 | 82611.5 |
| gh92 family glycosyl hydrolase | LC55x_RS14680 | Not Available | Negative | 3708063 - 3711536 | 127142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
