Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | LC55x_RS14585 | Not Available | Negative | 3685441 - 3686256 | 29253.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | LC55x_RS14590 | Not Available | Negative | 3686250 - 3686999 | 26972.1 |
| imidazole glycerol phosphate synthase subunit hish | LC55x_RS14595 | Not Available | Negative | 3687002 - 3687613 | 21383.0 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | LC55x_RS14600 | Not Available | Negative | 3687613 - 3688884 | 46512.9 |
| histidinol-phosphate transaminase | LC55x_RS14605 | Not Available | Negative | 3688881 - 3689981 | 39346.3 |
| histidinol dehydrogenase | LC55x_RS14610 | Not Available | Negative | 3690053 - 3691390 | 47061.7 |
| atp phosphoribosyltransferase | LC55x_RS14615 | Not Available | Negative | 3691399 - 3692313 | 32819.9 |
| yerc/yecd family trpr-related protein | LC55x_RS14620 | Not Available | Negative | 3692428 - 3692739 | 11462.6 |
| diguanylate cyclase | LC55x_RS14625 | Not Available | Positive | 3692994 - 3694901 | 70739.3 |
| 2og-fe(ii) oxygenase | LC55x_RS14630 | Not Available | Negative | 3694914 - 3695462 | 20596.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
