Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosinase family protein | LC55x_RS14100 | Not Available | Positive | 3578129 - 3579781 | 59749.7 |
| hypothetical protein | LC55x_RS14105 | Not Available | Positive | 3579787 - 3580167 | 13059.8 |
| amidohydrolase family protein | LC55x_RS14110 | Not Available | Positive | 3580251 - 3580955 | 26172.5 |
| m14 family metallocarboxypeptidase | LC55x_RS14115 | Not Available | Negative | 3581017 - 3581937 | 33271.0 |
| caspase family protein | LC55x_RS14120 | Not Available | Positive | 3582072 - 3583862 | 64057.3 |
| hypothetical protein | LC55x_RS14125 | Not Available | Positive | 3583859 - 3584749 | 32497.7 |
| yqaa family protein | LC55x_RS14130 | Not Available | Negative | 3584778 - 3585200 | 15265.0 |
| m13 family metallopeptidase | LC55x_RS14135 | Not Available | Negative | 3585404 - 3587464 | 75798.7 |
| dead/deah box helicase | LC55x_RS14140 | Not Available | Positive | 3587797 - 3589629 | 68017.5 |
| hypothetical protein | LC55x_RS14145 | Not Available | Negative | 3589686 - 3590309 | 23197.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
