Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ig domain-containing protein | LC55x_RS13805 | Not Available | Negative | 3511186 - 3517866 | 221692.0 |
| phage tail protein | LC55x_RS13810 | Not Available | Positive | 3518185 - 3518712 | 18168.5 |
| phage tail protein | LC55x_RS13815 | Not Available | Positive | 3518786 - 3519316 | 18407.0 |
| phage tail protein | LC55x_RS13820 | Not Available | Positive | 3519380 - 3519925 | 18971.3 |
| gnat family n-acetyltransferase | LC55x_RS13825 | Not Available | Positive | 3519929 - 3520489 | 21126.4 |
| hypothetical protein | LC55x_RS13830 | Not Available | Positive | 3520505 - 3520741 | 8529.43 |
| duf6916 family protein | LC55x_RS13835 | Not Available | Negative | 3520852 - 3521142 | 10817.0 |
| ig-like domain-containing protein | LC55x_RS13840 | Not Available | Negative | 3521845 - 3522396 | 19316.9 |
| duf1993 family protein | LC55x_RS13845 | Not Available | Negative | 3523159 - 3523668 | 18800.7 |
| redox-sensitive transcriptional activator soxr | LC55x_RS13850 | Not Available | Negative | 3523817 - 3524296 | 17556.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
