Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii caax prenyl endopeptidase rce1 family protein | LC55x_RS13400 | Not Available | Negative | 3415144 - 3415890 | 25513.4 |
| duf11 domain-containing protein | LC55x_RS13405 | Not Available | Negative | 3416314 - 3418563 | 74598.6 |
| polyribonucleotide nucleotidyltransferase | LC55x_RS13410 | Not Available | Negative | 3418951 - 3421059 | 75622.3 |
| 30s ribosomal protein s15 | LC55x_RS13415 | Not Available | Negative | 3421320 - 3421580 | 10040.2 |
| trna pseudouridine(55) synthase trub | LC55x_RS13420 | Not Available | Negative | 3421851 - 3422783 | 33157.9 |
| heme-binding protein | LC55x_RS13425 | Not Available | Negative | 3422767 - 3423201 | 15030.4 |
| 30s ribosome-binding factor rbfa | LC55x_RS13430 | Not Available | Negative | 3423572 - 3423973 | 14923.6 |
| translation initiation factor if-2 | LC55x_RS13435 | Not Available | Negative | 3424088 - 3426730 | 93869.0 |
| transcription termination factor nusa | LC55x_RS13440 | Not Available | Negative | 3426943 - 3428430 | 54590.6 |
| ribosome maturation factor rimp | LC55x_RS13445 | Not Available | Negative | 3428532 - 3429146 | 21986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
