Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | LC55x_RS12960 | Not Available | Negative | 3296687 - 3297268 | 20712.7 |
| carbohydrate porin | LC55x_RS12965 | Not Available | Negative | 3297629 - 3298939 | 47413.5 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | LC55x_RS12970 | Not Available | Negative | 3299025 - 3300548 | 53770.9 |
| 5-deoxy-glucuronate isomerase | LC55x_RS12975 | Not Available | Negative | 3300575 - 3301372 | 29358.8 |
| myo-inosose-2 dehydratase | LC55x_RS12980 | Not Available | Negative | 3301369 - 3302286 | 33267.7 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | LC55x_RS12985 | Not Available | Negative | 3302279 - 3304222 | 68965.4 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | LC55x_RS12990 | Not Available | Negative | 3304219 - 3306174 | 71322.1 |
| atp-binding cassette domain-containing protein | LC55x_RS12995 | Not Available | Negative | 3306215 - 3307006 | 28793.2 |
| abc transporter permease | LC55x_RS13000 | Not Available | Negative | 3307017 - 3308126 | 38881.2 |
| sugar abc transporter substrate-binding protein | LC55x_RS13005 | Not Available | Negative | 3308284 - 3309372 | 38066.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
