Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | LC55x_RS12765 | Not Available | Negative | 3235543 - 3236427 | 32955.2 |
| hypothetical protein | LC55x_RS27030 | Not Available | Negative | 3236452 - 3236727 | 9936.87 |
| sodium:solute symporter family transporter | LC55x_RS12770 | Not Available | Negative | 3236757 - 3238319 | 56469.7 |
| 2-dehydro-3-deoxygalactonokinase | LC55x_RS12775 | Not Available | Negative | 3238432 - 3239316 | 31905.4 |
| smp-30/gluconolactonase/lre family protein | LC55x_RS12780 | Not Available | Negative | 3239313 - 3240230 | 33859.8 |
| galactonate dehydratase | LC55x_RS12785 | Not Available | Negative | 3240260 - 3241408 | 42246.9 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | LC55x_RS12790 | Not Available | Negative | 3241405 - 3242037 | 21382.9 |
| sdr family oxidoreductase | LC55x_RS12795 | Not Available | Negative | 3242049 - 3242828 | 27541.7 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | LC55x_RS12800 | Not Available | Negative | 3242825 - 3246040 | 119187.0 |
| tonb-dependent receptor | LC55x_RS12805 | Not Available | Negative | 3246040 - 3248778 | 98496.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
