Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad kinase | LC55x_RS12620 | Not Available | Negative | 3200444 - 3201223 | 28254.8 |
| hypothetical protein | LC55x_RS27020 | Not Available | Negative | 3201468 - 3202064 | 21673.9 |
| nad-glutamate dehydrogenase domain-containing protein | LC55x_RS12630 | Not Available | Negative | 3202153 - 3207273 | 188228.0 |
| hypothetical protein | LC55x_RS27025 | Not Available | Negative | 3207339 - 3207521 | 6101.32 |
| acyl-coa dehydrogenase family protein | LC55x_RS12635 | Not Available | Negative | 3207534 - 3208694 | 41777.1 |
| metalloregulator arsr/smtb family transcription factor | LC55x_RS12640 | Not Available | Positive | 3209131 - 3210093 | 35188.2 |
| homocysteine s-methyltransferase family protein | LC55x_RS12645 | Not Available | Positive | 3210104 - 3211225 | 39983.2 |
| methionine synthase | LC55x_RS12650 | Not Available | Positive | 3211356 - 3214151 | 103540.0 |
| hypothetical protein | LC55x_RS12655 | Not Available | Positive | 3214222 - 3214956 | 27178.5 |
| right-handed parallel beta-helix repeat-containing protein | LC55x_RS12660 | Not Available | Negative | 3215125 - 3215958 | 29575.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
