Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s18 | LC55x_RS12420 | Not Available | Negative | 3158048 - 3158278 | 8917.84 |
| 30s ribosomal protein s6 | LC55x_RS12425 | Not Available | Negative | 3158290 - 3158718 | 16422.3 |
| duf885 family protein | LC55x_RS12430 | Not Available | Negative | 3159113 - 3160918 | 67050.7 |
| iron-sulfur cluster assembly accessory protein | LC55x_RS12435 | Not Available | Negative | 3161517 - 3161855 | 12116.3 |
| duf2891 domain-containing protein | LC55x_RS12440 | Not Available | Negative | 3162200 - 3163366 | 42585.9 |
| asparagine--trna ligase | LC55x_RS12445 | Not Available | Positive | 3163534 - 3164934 | 51869.3 |
| hypothetical protein | LC55x_RS12450 | Not Available | Positive | 3165195 - 3165500 | 11099.8 |
| hypothetical protein | LC55x_RS12455 | Not Available | Positive | 3165500 - 3165808 | 11182.0 |
| fmn-binding negative transcriptional regulator | LC55x_RS12460 | Not Available | Positive | 3165817 - 3166452 | 24318.7 |
| sdr family oxidoreductase | LC55x_RS12465 | Not Available | Positive | 3166509 - 3167294 | 26767.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
