Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LC55x_RS12140 | Not Available | Negative | 3035344 - 3036576 | 44470.7 |
| carbohydrate kinase family protein | LC55x_RS12145 | Not Available | Negative | 3036592 - 3037566 | 34644.4 |
| rok family transcriptional regulator | LC55x_RS12150 | Not Available | Negative | 3037627 - 3038877 | 45071.1 |
| glycoside hydrolase family 9 protein | LC55x_RS12155 | Not Available | Positive | 3039009 - 3040892 | 67977.0 |
| is3 family transposase | LC55x_RS12165 | Not Available | Positive | 3041677 - 3042818 | 43929.9 |
| dna-binding protein | LC55x_RS12170 | Not Available | Positive | 3042853 - 3043806 | 34834.9 |
| hypothetical protein | LC55x_RS12175 | Not Available | Positive | 3044452 - 3044709 | 9635.68 |
| duf4124 domain-containing protein | LC55x_RS26995 | Not Available | Negative | 3044829 - 3045251 | 15320.9 |
| zonular occludens toxin domain-containing protein | LC55x_RS12180 | Not Available | Negative | 3045603 - 3046769 | 42022.8 |
| duf2523 family protein | LC55x_RS12185 | Not Available | Negative | 3046769 - 3047053 | 10252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
