Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xvipcd domain-containing protein | LC55x_RS26160 | Not Available | Negative | 2880097 - 2881407 | 47062.3 |
| hypothetical protein | LC55x_RS26970 | Not Available | Negative | 2881442 - 2882131 | 24551.7 |
| peptidoglycan-binding protein | LC55x_RS11760 | Not Available | Negative | 2882389 - 2883408 | 36299.0 |
| is3 family transposase | LC55x_RS11770 | Not Available | Positive | 2883446 - 2884587 | 43929.9 |
| duf4189 domain-containing protein | LC55x_RS26165 | Not Available | Negative | 2884614 - 2885024 | 14564.4 |
| type iv secretion system protein | LC55x_RS11775 | Not Available | Negative | 2885028 - 2886149 | 40546.6 |
| hypothetical protein | LC55x_RS11780 | Not Available | Negative | 2886190 - 2886993 | 29444.9 |
| hypothetical protein | LC55x_RS26975 | Not Available | Negative | 2887063 - 2887413 | 13498.4 |
| response regulator transcription factor | LC55x_RS11785 | Not Available | Positive | 2887446 - 2888045 | 21718.8 |
| response regulator transcription factor | LC55x_RS11790 | Not Available | Negative | 2888170 - 2888757 | 21443.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
