Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity iron permease family protein | LC55x_RS11555 | Not Available | Positive | 2826612 - 2827124 | 18857.1 |
| ku protein | LC55x_RS11560 | Not Available | Positive | 2827127 - 2828038 | 34041.2 |
| dna ligase d | LC55x_RS11565 | Not Available | Positive | 2828075 - 2830783 | 99595.0 |
| mgtc/sapb family protein | LC55x_RS11570 | Not Available | Negative | 2830937 - 2831464 | 18460.0 |
| methyltransferase | LC55x_RS11575 | Not Available | Positive | 2831685 - 2831855 | 6503.5 |
| bon domain-containing protein | LC55x_RS11580 | Not Available | Positive | 2831977 - 2832351 | 12439.6 |
| duf3247 family protein | LC55x_RS11585 | Not Available | Positive | 2832563 - 2832883 | 11782.9 |
| giy-yig nuclease family protein | LC55x_RS11590 | Not Available | Positive | 2832936 - 2833559 | 23603.1 |
| hypothetical protein | LC55x_RS11595 | Not Available | Positive | 2833602 - 2833793 | 6742.1 |
| alpha-ketoglutarate-dependent dioxygenase alkb | LC55x_RS11600 | Not Available | Negative | 2833822 - 2834400 | 21835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
