Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | LC55x_RS11275 | Not Available | Positive | 2750380 - 2750604 | 8005.57 |
| type ii toxin-antitoxin system vapc family toxin | LC55x_RS11280 | Not Available | Positive | 2750609 - 2751007 | 14220.3 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | LC55x_RS11285 | Not Available | Positive | 2751156 - 2753756 | 92894.5 |
| hypothetical protein | LC55x_RS11290 | Not Available | Positive | 2754054 - 2754608 | 19831.9 |
| high frequency lysogenization protein hfld | LC55x_RS11295 | Not Available | Negative | 2755596 - 2756204 | 21878.5 |
| trna 2-thiouridine(34) synthase mnma | LC55x_RS11300 | Not Available | Negative | 2756204 - 2757346 | 41325.7 |
| nudix hydrolase | LC55x_RS11305 | Not Available | Negative | 2757352 - 2757846 | 18323.8 |
| ybjn domain-containing protein | LC55x_RS11310 | Not Available | Negative | 2757848 - 2758450 | 21546.3 |
| atp-dependent clp protease adapter clps | LC55x_RS11315 | Not Available | Positive | 2758630 - 2758950 | 12084.7 |
| atp-dependent clp protease atp-binding subunit clpa | LC55x_RS11320 | Not Available | Positive | 2759040 - 2761319 | 83448.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
