Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 87): tctagttgccaacgacga | Not Available | Not Available | Positive | 2678416 - 2678769 | Not Available |
| helix-turn-helix domain-containing protein | LC55x_RS11030 | Not Available | Negative | 2679010 - 2679381 | 13928.8 |
| hypothetical protein | LC55x_RS11035 | Not Available | Positive | 2679569 - 2679982 | 14466.3 |
| hypothetical protein | LC55x_RS11040 | Not Available | Positive | 2679982 - 2680353 | 14148.5 |
| chase domain-containing protein | LC55x_RS11045 | Not Available | Positive | 2680421 - 2682652 | 82507.6 |
| ssra-binding protein smpb | LC55x_RS11050 | Not Available | Negative | 2683256 - 2683768 | 19302.3 |
| type ii toxin-antitoxin system rata family toxin | LC55x_RS11055 | Not Available | Positive | 2683950 - 2684426 | 17391.8 |
| rnfh family protein | LC55x_RS11060 | Not Available | Positive | 2684423 - 2684689 | 9695.66 |
| outer membrane protein assembly factor bame | LC55x_RS11065 | Not Available | Negative | 2684810 - 2685211 | 15514.6 |
| ferric iron uptake transcriptional regulator | LC55x_RS11070 | Not Available | Positive | 2685432 - 2685833 | 15531.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
