Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS10890 | Not Available | Positive | 2642753 - 2643499 | 27748.3 |
| type iv secretion system protein | LC55x_RS10895 | Not Available | Positive | 2643610 - 2644845 | 43111.1 |
| duf4189 domain-containing protein | LC55x_RS26115 | Not Available | Positive | 2644870 - 2645376 | 17232.1 |
| duf4189 domain-containing protein | LC55x_RS26120 | Not Available | Positive | 2645573 - 2646088 | 17151.7 |
| duf4189 domain-containing protein | LC55x_RS26125 | Not Available | Positive | 2646107 - 2646619 | 17943.3 |
| duf4189 domain-containing protein | LC55x_RS26130 | Not Available | Positive | 2646628 - 2647125 | 17223.2 |
| error-prone dna polymerase | LC55x_RS10910 | Not Available | Negative | 2647236 - 2650376 | 116639.0 |
| dna polymerase y family protein | LC55x_RS10915 | Not Available | Negative | 2650373 - 2651821 | 53767.6 |
| translesion dna synthesis-associated protein imua | LC55x_RS10920 | Not Available | Negative | 2651832 - 2652704 | 31016.6 |
| transcriptional repressor lexa | LC55x_RS10925 | Not Available | Negative | 2652709 - 2653332 | 22778.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
