Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stm4012 family radical sam protein | LC55x_RS10655 | Not Available | Negative | 2592160 - 2593515 | 50304.2 |
| stm4013/sen3800 family hydrolase | LC55x_RS10660 | Not Available | Negative | 2593578 - 2594399 | 30129.4 |
| stm4014 family protein | LC55x_RS10665 | Not Available | Negative | 2594392 - 2595507 | 41401.2 |
| stm4015 family protein | LC55x_RS10670 | Not Available | Negative | 2595532 - 2596446 | 33605.5 |
| gntp family permease | LC55x_RS10675 | Not Available | Negative | 2596695 - 2598092 | 48462.5 |
| tonb-dependent receptor | LC55x_RS10680 | Not Available | Positive | 2598441 - 2600684 | 81282.8 |
| hypothetical protein | LC55x_RS26935 | Not Available | Positive | 2600889 - 2601179 | 9874.14 |
| pas-domain containing protein | LC55x_RS10685 | Not Available | Positive | 2601276 - 2604626 | 119881.0 |
| response regulator transcription factor | LC55x_RS10690 | Not Available | Negative | 2605026 - 2605691 | 23633.3 |
| 3-hydroxybutyrate oligomer hydrolase family protein | LC55x_RS10695 | Not Available | Positive | 2605811 - 2607775 | 68041.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
