Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | LC55x_RS10600 | Not Available | Positive | 2582696 - 2583262 | 21330.6 |
| mechanosensitive ion channel family protein | LC55x_RS10605 | Not Available | Negative | 2583451 - 2584416 | 34351.2 |
| phosphoenolpyruvate synthase | LC55x_RS10610 | Not Available | Negative | 2584424 - 2586805 | 86564.6 |
| pyruvate, water dikinase regulatory protein | LC55x_RS10615 | Not Available | Positive | 2586940 - 2587761 | 30756.6 |
| duf1249 domain-containing protein | LC55x_RS10620 | Not Available | Positive | 2588143 - 2588694 | 20385.2 |
| Trna-ala | Not Available | Not Available | Positive | 2588740 - 2588815 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2588872 - 2588947 | Not Available |
| alpha/beta hydrolase | LC55x_RS10640 | Not Available | Positive | 2589357 - 2590193 | 31513.0 |
| hypothetical protein | LC55x_RS10645 | Not Available | Negative | 2590323 - 2591039 | 25145.8 |
| stm4011 family radical sam protein | LC55x_RS10650 | Not Available | Negative | 2591255 - 2592157 | 33570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
