Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | LC55x_RS10445 | Not Available | Negative | 2551324 - 2553699 | 85704.0 |
| tetr/acrr family transcriptional regulator | LC55x_RS10450 | Not Available | Negative | 2553861 - 2554481 | 22722.2 |
| nucleoside-diphosphate kinase | LC55x_RS10455 | Not Available | Positive | 2554915 - 2555340 | 15374.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | LC55x_RS10460 | Not Available | Positive | 2555530 - 2556699 | 43587.7 |
| type iv pilus biogenesis/stability protein pilw | LC55x_RS10465 | Not Available | Positive | 2556704 - 2557561 | 30987.0 |
| rodz domain-containing protein | LC55x_RS10470 | Not Available | Positive | 2557561 - 2558382 | 28334.6 |
| tetratricopeptide repeat protein | LC55x_RS10475 | Not Available | Positive | 2558517 - 2559146 | 22194.4 |
| outer membrane protein assembly factor bamb | LC55x_RS10480 | Not Available | Positive | 2559149 - 2560384 | 43275.3 |
| ribosome biogenesis gtpase der | LC55x_RS10485 | Not Available | Positive | 2560809 - 2562209 | 51529.8 |
| molybdenum cofactor guanylyltransferase | LC55x_RS10490 | Not Available | Positive | 2562572 - 2563198 | 21995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
