Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | LC55x_RS10395 | Not Available | Positive | 2541205 - 2542380 | 43740.1 |
| hypothetical protein | LC55x_RS10400 | Not Available | Positive | 2542384 - 2543385 | 35873.5 |
| nucleoside-diphosphate sugar epimerase/dehydratase | LC55x_RS10405 | Not Available | Positive | 2543425 - 2545335 | 69960.8 |
| utp--glucose-1-phosphate uridylyltransferase galu | LC55x_RS10410 | Not Available | Positive | 2545335 - 2546234 | 32489.2 |
| hypothetical protein | LC55x_RS10415 | Not Available | Negative | 2546303 - 2546764 | 17591.5 |
| fad-binding oxidoreductase | LC55x_RS10420 | Not Available | Positive | 2546845 - 2548140 | 48225.6 |
| pp_02108 | LC55x_RS10425 | Not Available | Positive | 2548137 - 2548493 | Not Available |
| hypothetical protein | LC55x_RS10430 | Not Available | Positive | 2548638 - 2548931 | 9903.1 |
| isoprenylcysteine carboxylmethyltransferase family protein | LC55x_RS10435 | Not Available | Negative | 2549128 - 2549862 | 27789.3 |
| acetyl-coa c-acyltransferase | LC55x_RS10440 | Not Available | Negative | 2550022 - 2551224 | 41843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
