Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rne/rng family ribonuclease | LC55x_RS10255 | Not Available | Negative | 2506350 - 2509892 | 126124.0 |
| rlua family pseudouridine synthase | LC55x_RS10260 | Not Available | Positive | 2510390 - 2511346 | 34778.8 |
| energy transducer tonb | LC55x_RS10265 | Not Available | Negative | 2511364 - 2512104 | 27080.4 |
| energy transducer tonb | LC55x_RS10270 | Not Available | Negative | 2512181 - 2512606 | 14706.8 |
| 4a-hydroxytetrahydrobiopterin dehydratase | LC55x_RS10275 | Not Available | Negative | 2512612 - 2512953 | 12774.0 |
| nfua family fe-s biogenesis protein | LC55x_RS10280 | Not Available | Positive | 2513096 - 2513692 | 21312.2 |
| hypothetical protein | LC55x_RS10285 | Not Available | Positive | 2513714 - 2515447 | 61392.4 |
| c-type cytochrome | LC55x_RS10290 | Not Available | Negative | 2516432 - 2516887 | 16085.8 |
| cytochrome c | LC55x_RS10295 | Not Available | Negative | 2516896 - 2517288 | 13541.0 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS10300 | Not Available | Positive | 2517738 - 2518805 | 37297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
