Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap family protein | LC55x_RS09595 | Not Available | Negative | 2378553 - 2378864 | 11970.2 |
| hypothetical protein | LC55x_RS09600 | Not Available | Positive | 2379093 - 2379329 | 8644.47 |
| hypothetical protein | LC55x_RS09605 | Not Available | Negative | 2379432 - 2379800 | 13002.7 |
| fumarate hydratase | LC55x_RS09610 | Not Available | Positive | 2379948 - 2381501 | 55379.9 |
| patatin-like phospholipase family protein | LC55x_RS09615 | Not Available | Negative | 2381700 - 2382656 | 34474.8 |
| phospholipase a | LC55x_RS09620 | Not Available | Negative | 2382738 - 2383913 | 43590.9 |
| duf456 domain-containing protein | LC55x_RS09625 | Not Available | Negative | 2384083 - 2384568 | 16768.4 |
| cold-shock protein | LC55x_RS09630 | Not Available | Positive | 2384782 - 2384988 | 7536.91 |
| m35 family metallo-endopeptidase | LC55x_RS09635 | Not Available | Negative | 2385824 - 2386930 | 39223.9 |
| glycine zipper 2tm domain-containing protein | LC55x_RS09640 | Not Available | Negative | 2387171 - 2387677 | 17102.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
