Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LC55x_RS09545 | Not Available | Positive | 2363101 - 2365398 | 83414.7 |
| glutathione peroxidase | LC55x_RS09550 | Not Available | Positive | 2365987 - 2366469 | 18031.3 |
| acyltransferase family protein | LC55x_RS09555 | Not Available | Negative | 2366813 - 2368045 | 46966.2 |
| lyttr family dna-binding domain-containing protein | LC55x_RS09560 | Not Available | Positive | 2368201 - 2369127 | 34997.2 |
| tlpa disulfide reductase family protein | LC55x_RS09565 | Not Available | Negative | 2369266 - 2369973 | 24839.5 |
| ferredoxin--nadp reductase | LC55x_RS09570 | Not Available | Negative | 2370032 - 2370841 | 30321.1 |
| tex family protein | LC55x_RS09575 | Not Available | Positive | 2371096 - 2373513 | 87811.8 |
| pqq-dependent sugar dehydrogenase | LC55x_RS09580 | Not Available | Negative | 2374651 - 2375847 | 42391.5 |
| hypothetical protein | LC55x_RS09585 | Not Available | Positive | 2376091 - 2376552 | 16012.9 |
| abc transporter atp-binding protein | LC55x_RS09590 | Not Available | Negative | 2376570 - 2378462 | 69915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
