Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS09495 | Not Available | Positive | 2347483 - 2348559 | 38798.6 |
| hypothetical protein | LC55x_RS09500 | Not Available | Positive | 2348620 - 2348925 | 11163.3 |
| glycerophosphodiester phosphodiesterase family protein | LC55x_RS26080 | Not Available | Positive | 2349349 - 2350659 | 47696.1 |
| nad-dependent protein deacetylase | LC55x_RS09510 | Not Available | Negative | 2351428 - 2352273 | 30400.9 |
| hypothetical protein | LC55x_RS09515 | Not Available | Negative | 2352397 - 2352849 | 16665.5 |
| yada family autotransporter adhesin | LC55x_RS09520 | Not Available | Negative | 2353048 - 2356389 | 109884.0 |
| response regulator transcription factor | LC55x_RS09525 | Not Available | Negative | 2356682 - 2357461 | 27926.4 |
| m3 family metallopeptidase | LC55x_RS09530 | Not Available | Negative | 2357739 - 2359958 | 81835.0 |
| voc family protein | LC55x_RS09535 | Not Available | Positive | 2360207 - 2360590 | 13978.6 |
| amidohydrolase family protein | LC55x_RS09540 | Not Available | Positive | 2360640 - 2362706 | 74083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
