Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | LC55x_RS09345 | Not Available | Negative | 2311590 - 2313680 | 76720.2 |
| deor/glpr family dna-binding transcription regulator | LC55x_RS09350 | Not Available | Positive | 2314158 - 2314940 | 27115.7 |
| mfs transporter | LC55x_RS09355 | Not Available | Positive | 2315212 - 2316426 | 40513.6 |
| yaii/yqxd family protein | LC55x_RS09360 | Not Available | Negative | 2316445 - 2316912 | 16982.5 |
| glutathione s-transferase | LC55x_RS09365 | Not Available | Positive | 2317052 - 2317732 | 25870.5 |
| ydiu family protein | LC55x_RS09370 | Not Available | Positive | 2317859 - 2319421 | 57665.8 |
| gnat family n-acetyltransferase | LC55x_RS09375 | Not Available | Positive | 2319612 - 2320481 | 31990.1 |
| hypothetical protein | LC55x_RS09380 | Not Available | Positive | 2320830 - 2321354 | 19550.5 |
| atp-binding cassette domain-containing protein | LC55x_RS09385 | Not Available | Positive | 2321451 - 2323352 | 70314.6 |
| srpbcc domain-containing protein | LC55x_RS09390 | Not Available | Positive | 2324191 - 2324766 | 20088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
