Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf-type sigma factor | LC55x_RS09295 | Not Available | Negative | 2301809 - 2302474 | 24756.6 |
| biotin-dependent carboxyltransferase family protein | LC55x_RS09300 | Not Available | Negative | 2302741 - 2303703 | 33738.5 |
| 5-oxoprolinase subunit pxpb | LC55x_RS09305 | Not Available | Negative | 2303700 - 2304428 | 25555.7 |
| hit family protein | LC55x_RS09310 | Not Available | Negative | 2304425 - 2304835 | 15454.5 |
| dienelactone hydrolase family protein | LC55x_RS09315 | Not Available | Negative | 2304832 - 2305506 | 24300.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | LC55x_RS09320 | Not Available | Positive | 2305658 - 2307019 | 49959.8 |
| nad(p)/fad-dependent oxidoreductase | LC55x_RS09325 | Not Available | Negative | 2307523 - 2308710 | 42366.9 |
| yaeq family protein | LC55x_RS09330 | Not Available | Negative | 2308712 - 2309269 | 20708.7 |
| pseudouridine synthase | LC55x_RS09335 | Not Available | Positive | 2309547 - 2310434 | 33171.1 |
| type 1 glutamine amidotransferase | LC55x_RS09340 | Not Available | Negative | 2310469 - 2311224 | 28758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
