Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | LC55x_RS09155 | Not Available | Positive | 2261728 - 2262573 | 29527.6 |
| pantoate--beta-alanine ligase | LC55x_RS09160 | Not Available | Positive | 2262713 - 2263564 | 31062.2 |
| aspartate 1-decarboxylase | LC55x_RS09165 | Not Available | Positive | 2263747 - 2264127 | 13732.3 |
| glucose-6-phosphate isomerase | LC55x_RS09170 | Not Available | Positive | 2264170 - 2265681 | 54563.9 |
| trna epoxyqueuosine(34) reductase queg | LC55x_RS09175 | Not Available | Negative | 2266089 - 2267216 | 41873.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | LC55x_RS09180 | Not Available | Positive | 2267215 - 2268729 | 51972.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | LC55x_RS09185 | Not Available | Positive | 2268777 - 2269289 | 17724.9 |
| n-acetylmuramoyl-l-alanine amidase | LC55x_RS28555 | Not Available | Positive | 2269377 - 2271149 | 60343.1 |
| hypothetical protein | LC55x_RS09195 | Not Available | Positive | 2271231 - 2271551 | 12312.6 |
| dna mismatch repair endonuclease mutl | LC55x_RS09200 | Not Available | Positive | 2271833 - 2273710 | 67832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
