Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing gnat family n-acetyltransferase | LC55x_RS09010 | Not Available | Negative | 2229484 - 2230425 | 35173.1 |
| transcriptional repressor lexa | LC55x_RS09015 | Not Available | Positive | 2230576 - 2231223 | 23427.2 |
| hypothetical protein | LC55x_RS26875 | Not Available | Positive | 2231240 - 2231488 | 8243.89 |
| recombinase reca | LC55x_RS09020 | Not Available | Positive | 2231526 - 2232551 | 36780.8 |
| recombination regulator recx | LC55x_RS28240 | Not Available | Positive | 2233076 - 2233576 | 18941.2 |
| alanine--trna ligase | LC55x_RS09030 | Not Available | Positive | 2233740 - 2236373 | 95068.0 |
| carbon storage regulator csra | LC55x_RS09035 | Not Available | Positive | 2236518 - 2236721 | 7193.66 |
| Trna-ser | Not Available | Not Available | Positive | 2236799 - 2236891 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2237023 - 2237099 | Not Available |
| duf6717 family protein | LC55x_RS09050 | Not Available | Positive | 2237760 - 2238107 | 13054.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
