Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | LC55x_RS08865 | Not Available | Negative | 2177561 - 2179099 | 54494.4 |
| is1595 family transposase | LC55x_RS08870 | Not Available | Negative | 2179877 - 2180527 | 24605.8 |
| rna-binding s4 domain-containing protein | LC55x_RS08875 | Not Available | Positive | 2180877 - 2181299 | 15281.3 |
| duf937 domain-containing protein | LC55x_RS08880 | Not Available | Negative | 2181688 - 2182323 | 20757.7 |
| catalase/peroxidase hpi | LC55x_RS08885 | Not Available | Negative | 2182673 - 2184853 | 79092.7 |
| hypothetical protein | LC55x_RS08890 | Not Available | Positive | 2185391 - 2185606 | 7596.03 |
| hypothetical protein | LC55x_RS08895 | Not Available | Positive | 2185822 - 2186043 | 7439.96 |
| aaa family atpase | LC55x_RS08900 | Not Available | Negative | 2186229 - 2189594 | 124562.0 |
| dna mismatch repair protein muts | LC55x_RS08905 | Not Available | Negative | 2190036 - 2192597 | 93777.1 |
| hypothetical protein | LC55x_RS08910 | Not Available | Positive | 2192779 - 2193552 | 29487.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
