Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | LC55x_RS08815 | Not Available | Negative | 2168324 - 2169838 | 53084.7 |
| marr family winged helix-turn-helix transcriptional regulator | LC55x_RS08820 | Not Available | Negative | 2169842 - 2170300 | 16906.1 |
| inner membrane protein ypjd | LC55x_RS08825 | Not Available | Negative | 2170588 - 2171379 | 29112.9 |
| signal recognition particle protein | LC55x_RS08830 | Not Available | Positive | 2171551 - 2172918 | 49291.8 |
| 30s ribosomal protein s16 | LC55x_RS08835 | Not Available | Positive | 2174113 - 2174370 | 9446.44 |
| ribosome maturation factor rimm | LC55x_RS08840 | Not Available | Positive | 2174418 - 2174933 | 19292.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | LC55x_RS08845 | Not Available | Positive | 2175013 - 2175849 | 30016.6 |
| 50s ribosomal protein l19 | LC55x_RS08850 | Not Available | Positive | 2175975 - 2176379 | 14809.9 |
| hypothetical protein | LC55x_RS08855 | Not Available | Positive | 2176676 - 2177002 | 11730.1 |
| hypothetical protein | LC55x_RS08860 | Not Available | Positive | 2177135 - 2177500 | 13649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
