Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | LC55x_RS08725 | Not Available | Positive | 2149350 - 2152163 | 104616.0 |
| signal peptidase ii | LC55x_RS08730 | Not Available | Positive | 2152260 - 2152772 | 18695.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | LC55x_RS08735 | Not Available | Positive | 2152894 - 2153844 | 34867.7 |
| Trna-thr | Not Available | Not Available | Positive | 2153922 - 2153997 | Not Available |
| hypothetical protein | LC55x_RS08745 | Not Available | Negative | 2154256 - 2154912 | 23628.1 |
| hypothetical protein | LC55x_RS08750 | Not Available | Positive | 2154924 - 2155769 | 31652.6 |
| rebb family r body protein | LC55x_RS28590 | Not Available | Positive | 2155990 - 2156094 | 3475.24 |
| hypothetical protein | LC55x_RS28595 | Not Available | Positive | 2156131 - 2156433 | 10661.8 |
| hypothetical protein | LC55x_RS08760 | Not Available | Positive | 2156734 - 2157021 | 10430.5 |
| dna repair protein rada | LC55x_RS08765 | Not Available | Positive | 2157622 - 2159034 | 49307.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
