Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3592 domain-containing protein | LC55x_RS08535 | Not Available | Positive | 2108461 - 2109180 | 26065.4 |
| quaternary ammonium compound efflux smr transporter suge | LC55x_RS08540 | Not Available | Positive | 2109331 - 2109642 | 10645.7 |
| acetyltransferase | LC55x_RS08545 | Not Available | Positive | 2109812 - 2110255 | 16723.9 |
| glycoside hydrolase family 19 protein | LC55x_RS08550 | Not Available | Negative | 2110337 - 2110948 | 23155.5 |
| hypothetical protein | LC55x_RS08555 | Not Available | Negative | 2111122 - 2111997 | 32952.7 |
| ribonuclease t | LC55x_RS08560 | Not Available | Negative | 2112176 - 2112823 | 23191.6 |
| duf2063 domain-containing protein | LC55x_RS08565 | Not Available | Negative | 2113041 - 2113835 | 29745.1 |
| duf692 domain-containing protein | LC55x_RS08570 | Not Available | Negative | 2113839 - 2114708 | 32833.7 |
| hypothetical protein | LC55x_RS08575 | Not Available | Negative | 2114758 - 2115207 | 14393.2 |
| rna polymerase sigma factor | LC55x_RS08580 | Not Available | Negative | 2115420 - 2115923 | 19174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
