Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | LC55x_RS08485 | Not Available | Negative | 2094988 - 2096115 | 41512.1 |
| tetratricopeptide repeat protein | LC55x_RS08490 | Not Available | Negative | 2096153 - 2097319 | 41619.9 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | LC55x_RS08495 | Not Available | Positive | 2097579 - 2099396 | 63871.3 |
| hypothetical protein | LC55x_RS26850 | Not Available | Positive | 2099440 - 2099979 | 19177.4 |
| pd40 domain-containing protein | LC55x_RS08505 | Not Available | Negative | 2100000 - 2100935 | 34639.4 |
| cgnr zinc finger domain-containing protein | LC55x_RS08510 | Not Available | Negative | 2100961 - 2101581 | 22968.1 |
| mbl fold metallo-hydrolase | LC55x_RS08515 | Not Available | Positive | 2101759 - 2102718 | 33690.4 |
| serine protease | LC55x_RS08520 | Not Available | Negative | 2102802 - 2104181 | 47927.3 |
| ribonuclease r | LC55x_RS08525 | Not Available | Positive | 2104635 - 2107127 | 91856.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | LC55x_RS08530 | Not Available | Positive | 2107698 - 2108459 | 26484.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
