Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m56 family metallopeptidase | LC55x_RS08390 | Not Available | Positive | 2071190 - 2073424 | 81577.6 |
| ump kinase | LC55x_RS08395 | Not Available | Negative | 2073626 - 2074348 | 25949.8 |
| aim24 family protein | LC55x_RS08400 | Not Available | Positive | 2074687 - 2075379 | 24836.9 |
| sh3 domain-containing protein | LC55x_RS08405 | Not Available | Positive | 2075468 - 2075863 | 13680.5 |
| integron | LC55x_RS08410 | Not Available | Positive | 2075906 - 2076313 | 13993.1 |
| translation elongation factor ts | LC55x_RS08415 | Not Available | Negative | 2076789 - 2077670 | 30806.0 |
| 30s ribosomal protein s2 | LC55x_RS08420 | Not Available | Negative | 2077844 - 2078695 | 30960.2 |
| mbl fold metallo-hydrolase | LC55x_RS08425 | Not Available | Negative | 2079176 - 2080090 | 31901.4 |
| type i methionyl aminopeptidase | LC55x_RS08430 | Not Available | Positive | 2080190 - 2080966 | 28397.3 |
| [protein-pii] uridylyltransferase | LC55x_RS08435 | Not Available | Positive | 2080963 - 2083665 | 98752.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
