Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase fabz | LC55x_RS08340 | Not Available | Negative | 2059592 - 2060047 | 16544.5 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | LC55x_RS08345 | Not Available | Negative | 2060235 - 2061263 | 35594.6 |
| outer membrane protein assembly factor bama | LC55x_RS08350 | Not Available | Negative | 2061290 - 2063764 | 91073.0 |
| rip metalloprotease rsep | LC55x_RS08355 | Not Available | Negative | 2063893 - 2065257 | 49267.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | LC55x_RS08360 | Not Available | Negative | 2065265 - 2066503 | 42453.0 |
| phosphatidate cytidylyltransferase | LC55x_RS08365 | Not Available | Negative | 2066799 - 2067671 | 30755.6 |
| polyprenyl diphosphate synthase | LC55x_RS08370 | Not Available | Negative | 2067668 - 2068438 | 28624.2 |
| ribosome recycling factor | LC55x_RS08375 | Not Available | Negative | 2068610 - 2069167 | 20575.7 |
| cation diffusion facilitator family transporter | LC55x_RS08380 | Not Available | Negative | 2069454 - 2070608 | 41720.8 |
| blai/meci/copy family transcriptional regulator | LC55x_RS08385 | Not Available | Positive | 2070802 - 2071188 | 14159.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
