Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | LC55x_RS08045 | Not Available | Negative | 1996698 - 1998422 | 63954.8 |
| leucine--trna ligase | LC55x_RS08050 | Not Available | Positive | 1998666 - 2001434 | 102749.0 |
| glutathione s-transferase family protein | LC55x_RS08055 | Not Available | Positive | 2001856 - 2002509 | 24840.6 |
| methyltransferase | LC55x_RS08060 | Not Available | Positive | 2002624 - 2003220 | 21584.8 |
| dna polymerase iii subunit delta | LC55x_RS08065 | Not Available | Positive | 2003174 - 2004220 | 38185.0 |
| nicotinate-nucleotide adenylyltransferase | LC55x_RS08070 | Not Available | Positive | 2004255 - 2004908 | 23901.5 |
| ribosome silencing factor | LC55x_RS08075 | Not Available | Positive | 2004961 - 2005395 | 16085.2 |
| bax inhibitor-1/ycca family protein | LC55x_RS08080 | Not Available | Negative | 2005589 - 2006350 | 27257.8 |
| Trna-pro | Not Available | Not Available | Positive | 2006576 - 2006652 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2006694 - 2006770 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
