Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LC55x_RS07755 | Not Available | Positive | 1920489 - 1921091 | 21828.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | LC55x_RS07760 | Not Available | Positive | 1921430 - 1922479 | 38547.3 |
| trna guanosine(34) transglycosylase tgt | LC55x_RS07765 | Not Available | Positive | 1922636 - 1923742 | 40953.0 |
| preprotein translocase subunit yajc | LC55x_RS07770 | Not Available | Positive | 1924019 - 1924372 | 12185.2 |
| protein translocase subunit secd | LC55x_RS07775 | Not Available | Positive | 1924431 - 1926293 | 66970.4 |
| protein translocase subunit secf | LC55x_RS07780 | Not Available | Positive | 1926310 - 1927275 | 34793.7 |
| hypothetical protein | LC55x_RS07785 | Not Available | Positive | 1927373 - 1927798 | 15830.0 |
| inositol monophosphatase family protein | LC55x_RS07790 | Not Available | Negative | 1927945 - 1928763 | 29661.6 |
| rna methyltransferase | LC55x_RS07795 | Not Available | Positive | 1928860 - 1929717 | 30383.4 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | LC55x_RS07800 | Not Available | Positive | 1929869 - 1930813 | 34610.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
