Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LC55x_RS07615 | Not Available | Negative | 1890383 - 1891030 | 23857.9 |
| sensor histidine kinase | LC55x_RS07620 | Not Available | Negative | 1891113 - 1891829 | 26291.5 |
| serine/threonine-protein kinase | LC55x_RS07625 | Not Available | Negative | 1891826 - 1895182 | 119219.0 |
| gaf domain-containing protein | LC55x_RS07630 | Not Available | Negative | 1895179 - 1896180 | 35831.5 |
| duf6689 family protein | LC55x_RS07635 | Not Available | Negative | 1896259 - 1897134 | 30999.9 |
| s8 family serine peptidase | LC55x_RS07640 | Not Available | Positive | 1897404 - 1898795 | 48121.1 |
| hypothetical protein | LC55x_RS26800 | Not Available | Negative | 1899011 - 1899556 | 17642.7 |
| duf6491 family protein | LC55x_RS07645 | Not Available | Negative | 1900026 - 1900490 | 16750.5 |
| Trna-phe | Not Available | Not Available | Positive | 1900659 - 1900734 | Not Available |
| hypothetical protein | LC55x_RS26805 | Not Available | Positive | 1901308 - 1901622 | 11732.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
