Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | LC55x_RS07565 | Not Available | Negative | 1879348 - 1880361 | 36527.1 |
| hypothetical protein | LC55x_RS07570 | Not Available | Positive | 1880620 - 1880970 | 12325.1 |
| pepsy domain-containing protein | LC55x_RS07575 | Not Available | Positive | 1880990 - 1882570 | 57326.2 |
| duf3325 domain-containing protein | LC55x_RS07580 | Not Available | Positive | 1882583 - 1882915 | 11967.0 |
| hypothetical protein | LC55x_RS07585 | Not Available | Negative | 1882940 - 1883218 | 10105.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | LC55x_RS07590 | Not Available | Negative | 1883232 - 1885139 | 68670.0 |
| hypothetical protein | LC55x_RS07595 | Not Available | Negative | 1885335 - 1886510 | 40624.7 |
| hnh endonuclease | LC55x_RS07600 | Not Available | Negative | 1886652 - 1887164 | 18808.7 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | LC55x_RS07605 | Not Available | Negative | 1887693 - 1889483 | 64174.0 |
| lea type 2 family protein | LC55x_RS07610 | Not Available | Negative | 1889608 - 1890090 | 16923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
