Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | LC55x_RS07475 | Not Available | Positive | 1860328 - 1862358 | 76225.0 |
| Trna-val | Not Available | Not Available | Positive | 1862466 - 1862540 | Not Available |
| hypothetical protein | LC55x_RS26790 | Not Available | Negative | 1862511 - 1862786 | 10459.5 |
| hypothetical protein | LC55x_RS27690 | Not Available | Positive | 1863620 - 1863787 | 6061.99 |
| hypothetical protein | LC55x_RS07485 | Not Available | Negative | 1863981 - 1865114 | 42699.5 |
| abc transporter atp-binding protein/permease | LC55x_RS07490 | Not Available | Negative | 1865111 - 1866937 | 66735.6 |
| threonine--trna ligase | LC55x_RS07495 | Not Available | Positive | 1867588 - 1869489 | 72086.9 |
| translation initiation factor if-3 | LC55x_RS07500 | Not Available | Positive | 1869563 - 1870087 | 20364.9 |
| 50s ribosomal protein l35 | LC55x_RS07505 | Not Available | Positive | 1870546 - 1870743 | 7533.32 |
| 50s ribosomal protein l20 | LC55x_RS07510 | Not Available | Positive | 1870756 - 1871115 | 13440.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
