Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3301 domain-containing protein | LC55x_RS07175 | Not Available | Negative | 1816100 - 1816423 | 11905.3 |
| carboxylating nicotinate-nucleotide diphosphorylase | LC55x_RS07180 | Not Available | Negative | 1816464 - 1817342 | 30792.9 |
| trm112 family protein | LC55x_RS07185 | Not Available | Negative | 1817339 - 1817608 | 9475.42 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | LC55x_RS07190 | Not Available | Positive | 1817673 - 1818209 | 17962.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | LC55x_RS07195 | Not Available | Positive | 1818206 - 1819345 | 40532.4 |
| hypothetical protein | LC55x_RS07200 | Not Available | Positive | 1819342 - 1819920 | 21580.5 |
| hypothetical protein | LC55x_RS07205 | Not Available | Negative | 1819979 - 1820506 | 18667.5 |
| superoxide dismutase | LC55x_RS07210 | Not Available | Negative | 1820846 - 1821424 | 21492.3 |
| grx4 family monothiol glutaredoxin | LC55x_RS07215 | Not Available | Positive | 1821617 - 1821937 | 11740.2 |
| sdr family nad(p)-dependent oxidoreductase | LC55x_RS07220 | Not Available | Positive | 1821934 - 1822692 | 26130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
