Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | LC55x_RS07130 | Not Available | Positive | 1806226 - 1807620 | 49848.7 |
| gnat family n-acetyltransferase | LC55x_RS07135 | Not Available | Negative | 1807900 - 1808442 | 19863.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | LC55x_RS07140 | Not Available | Negative | 1808466 - 1809878 | 51512.4 |
| lytic transglycosylase domain-containing protein | LC55x_RS07145 | Not Available | Positive | 1810048 - 1811067 | 35081.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | LC55x_RS07150 | Not Available | Positive | 1811485 - 1812105 | 22212.8 |
| cytochrome bc complex cytochrome b subunit | LC55x_RS07155 | Not Available | Positive | 1812109 - 1813368 | 47748.5 |
| cytochrome c1 | LC55x_RS07160 | Not Available | Positive | 1813529 - 1814188 | 25104.8 |
| glutathione s-transferase n-terminal domain-containing protein | LC55x_RS07165 | Not Available | Positive | 1814363 - 1814998 | 23826.1 |
| hypothetical protein | LC55x_RS28070 | Not Available | Positive | 1815087 - 1815281 | 6894.38 |
| clpxp protease specificity-enhancing factor | LC55x_RS07170 | Not Available | Positive | 1815331 - 1815828 | 17403.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
