Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein | LC55x_RS06930 | Not Available | Negative | 1755588 - 1756736 | 42572.4 |
| sdr family oxidoreductase | LC55x_RS06935 | Not Available | Negative | 1757273 - 1758205 | 34010.8 |
| hypothetical protein | LC55x_RS06940 | Not Available | Positive | 1758412 - 1760445 | 73489.4 |
| dtdp-glucose 4,6-dehydratase | LC55x_RS06945 | Not Available | Positive | 1760846 - 1761898 | 38393.4 |
| glucose-1-phosphate thymidylyltransferase rfba | LC55x_RS06950 | Not Available | Positive | 1761923 - 1762807 | 32725.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LC55x_RS06955 | Not Available | Positive | 1762818 - 1763375 | 20709.4 |
| dtdp-4-dehydrorhamnose reductase | LC55x_RS06960 | Not Available | Positive | 1763387 - 1764289 | 32208.3 |
| s9 family peptidase | LC55x_RS06965 | Not Available | Positive | 1764701 - 1766716 | 73313.6 |
| peptide mfs transporter | LC55x_RS06970 | Not Available | Negative | 1766959 - 1768731 | 63707.6 |
| opt family oligopeptide transporter | LC55x_RS06975 | Not Available | Positive | 1769148 - 1771094 | 67326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
