Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS06880 | Not Available | Negative | 1740988 - 1741266 | 10239.6 |
| n-acetylglucosamine-6-phosphate deacetylase | LC55x_RS06885 | Not Available | Negative | 1741422 - 1742528 | 38638.6 |
| deor family transcriptional regulator | LC55x_RS06890 | Not Available | Negative | 1742525 - 1743301 | 28164.8 |
| d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunit | LC55x_RS06895 | Not Available | Negative | 1743335 - 1744657 | 48188.2 |
| rok family protein | LC55x_RS06900 | Not Available | Negative | 1744707 - 1745648 | 31919.7 |
| sis domain-containing protein | LC55x_RS06905 | Not Available | Negative | 1745641 - 1746825 | 42638.8 |
| tim-barrel domain-containing protein | LC55x_RS06910 | Not Available | Positive | 1747160 - 1750510 | 122791.0 |
| tonb-dependent receptor domain-containing protein | LC55x_RS06915 | Not Available | Positive | 1750728 - 1753730 | 109120.0 |
| duf2867 domain-containing protein | LC55x_RS06920 | Not Available | Positive | 1753922 - 1754467 | 19957.2 |
| thioesterase ii family protein | LC55x_RS06925 | Not Available | Negative | 1754502 - 1755272 | 28361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
