Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent alcohol dehydrogenase | LC55x_RS06730 | Not Available | Negative | 1709553 - 1710620 | 37833.5 |
| lysr family transcriptional regulator | LC55x_RS06735 | Not Available | Positive | 1710751 - 1711638 | 33023.0 |
| nad(p)-dependent oxidoreductase | LC55x_RS06740 | Not Available | Negative | 1711738 - 1712388 | 23500.6 |
| doxx family protein | LC55x_RS06745 | Not Available | Negative | 1712601 - 1713005 | 14344.8 |
| helix-turn-helix domain-containing protein | LC55x_RS06750 | Not Available | Positive | 1713101 - 1713481 | 14471.8 |
| hypothetical protein | LC55x_RS06755 | Not Available | Negative | 1713743 - 1715338 | 58072.7 |
| pectate lyase | LC55x_RS06760 | Not Available | Negative | 1715498 - 1716292 | 28091.1 |
| laci family dna-binding transcriptional regulator | LC55x_RS06765 | Not Available | Positive | 1716517 - 1717926 | 51183.6 |
| cupin domain-containing protein | LC55x_RS06770 | Not Available | Negative | 1717958 - 1718398 | 15875.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | LC55x_RS06775 | Not Available | Negative | 1718420 - 1719181 | 26379.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
