Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS06590 | Not Available | Positive | 1683917 - 1684381 | 15956.1 |
| flagellar type iii secretion system pore protein flip | LC55x_RS06595 | Not Available | Positive | 1684413 - 1685129 | 25585.3 |
| sigma-70 family rna polymerase sigma factor | LC55x_RS06600 | Not Available | Positive | 1685146 - 1685838 | 25862.6 |
| single-stranded dna-binding protein | LC55x_RS06605 | Not Available | Positive | 1686210 - 1686758 | 19081.1 |
| universal stress protein | LC55x_RS06610 | Not Available | Negative | 1687092 - 1687916 | 30205.3 |
| gnat family n-acetyltransferase | LC55x_RS06615 | Not Available | Positive | 1687974 - 1688627 | 24460.2 |
| low affinity iron permease family protein | LC55x_RS06620 | Not Available | Positive | 1688680 - 1689051 | 13963.8 |
| duf4010 domain-containing protein | LC55x_RS06625 | Not Available | Negative | 1689102 - 1690358 | 42951.7 |
| zinc-dependent alcohol dehydrogenase | LC55x_RS06630 | Not Available | Negative | 1690374 - 1691411 | 36190.9 |
| response regulator | LC55x_RS06635 | Not Available | Positive | 1691558 - 1692304 | 27024.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
